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Sample GSM230289 Query DataSets for GSM230289
Status Public on Nov 01, 2007
Title CD49a+ rep4 (stromal cell study)
Sample type RNA
 
Source name normal prostate
Organism Homo sapiens
Characteristics CD49a+ MACS sorted cells
Extracted molecule total RNA
Extraction protocol Prostate tissue was MACS sorted for positive cells. Total RNA was extracted from the cell lysate using an RNeasy kit (Qiagen).
Label biotin
Label protocol Approximately 200 ng of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Prostate stromal fibromuscular cells
Data processing RMA of .cel files with Genespring 7.2
 
Submission date Sep 18, 2007
Last update date Aug 28, 2018
Contact name Jennifer A Hipp
E-mail(s) [email protected]
Organization name Wake Forest School of Medicine
Department Institute for Regenerative Medicine
Lab Atala
Street address Medical Center Blvd
City Winston-Salem
State/province NC
ZIP/Postal code 27157
Country USA
 
Platform ID GPL570
Series (2)
GSE9090 Reanalysis of GSE8884 Samples with Stromal Samples from GSE3998.
GSE9196 Comparison of ES, EB, and Blast cells to breast epithelial, leuckocytes, endothelial and stromal cells
Relations
Reanalysis of GSM91317
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
1007_s_at 7.688673123
1053_at 5.837248585
117_at 8.304720645
121_at 6.90928464
1255_g_at 3.196840307
1294_at 7.055801964
1316_at 5.650624314
1320_at 4.827394167
1405_i_at 3.733557841
1431_at 3.082174353
1438_at 5.362879672
1487_at 6.339073694
1494_f_at 4.846734387
1552256_a_at 6.170313729
1552257_a_at 6.128524215
1552258_at 4.370383451
1552261_at 4.883322144
1552263_at 4.843069566
1552264_a_at 5.001077386
1552266_at 4.628189356

Total number of rows: 54675

Table truncated, full table size 1198 Kbytes.




Supplementary file Size Download File type/resource
GSM230289_20040701_01_CD49a-1_06-02-04.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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