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| Status |
Public on Aug 11, 2004 |
| Title |
850SFMC |
| Sample type |
RNA |
| |
|
| Source name |
SFMC
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Description |
SFMC isolated by Ficoll gradient centrifugation from polyarticular JRA patient
Biotinylated cRNA was synthesized from total RNA (Enzo; Farmingdale, NY) and processed according to the Affymetrix GeneChip Expression Analysis Technical Manual (Affymetrix; Santa Clara, CA). 57 samples: 5 pauciarticular PBMC, 15 polyarticular PBMC, 11 control PMBC, 6 JSpA PBMC, 5 pauciarticular SFMC, 10 polyarticular PBMC, 5 JSpA SFMC classified by course.
Keywords = Polyarticular course, juvenile rheumatoid arthritis (JRA), synovial fluid mononuclear cells (SFMC)
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| |
|
| Submission date |
May 13, 2004 |
| Last update date |
Mar 16, 2009 |
| Contact name |
Michael Barnes |
| E-mail(s) |
[email protected]
|
| Phone |
513-636-1319
|
| Organization name |
Cincinnati Childrens Hospital Medical Center
|
| Department |
Rheumatology
|
| Lab |
Dr. David Glass
|
| Street address |
3333 Burnet Ave
|
| City |
Cincinnati |
| State/province |
OH |
| ZIP/Postal code |
45229 |
| Country |
USA |
| |
|
| Platform ID |
GPL8300 |
| Series (1) |
| GSE1402 |
Juvenile Rheumatoid Arthritis Profiles In PBMC and SFMC |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Normalized expression value; GeneSpring4 |
| ABS_CALL |
Present(P), absent (A) or marginal (M) calls; MAS 5.0 |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
| 100_g_at |
0.9859546 |
A |
| 1000_at |
1.1886207 |
P |
| 1001_at |
0.972724 |
A |
| 1002_f_at |
1.3525798 |
A |
| 1003_s_at |
0.6573642 |
A |
| 1004_at |
0.5506478 |
A |
| 1005_at |
0.27424815 |
P |
| 1006_at |
2.7894373 |
A |
| 1007_s_at |
1.2066517 |
A |
| 1008_f_at |
2.6376371 |
P |
| 1009_at |
1.3356955 |
P |
| 101_at |
1.212775 |
A |
| 1010_at |
1.8922031 |
A |
| 1011_s_at |
0.9029797 |
P |
| 1012_at |
1.1416885 |
P |
| 1013_at |
0.7130701 |
A |
| 1014_at |
1.1157317 |
P |
| 1015_s_at |
1 |
A |
| 1016_s_at |
0.4028603 |
A |
| 1017_at |
0.8569404 |
P |
Total number of rows: 12625
Table truncated, full table size 262 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM23205.CEL.gz |
2.6 Mb |
(ftp)(http) |
CEL |
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