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Sample GSM23595

Query DataSets for GSM23595

Status

Public on Jul 15, 2004

Title

AG 10h1

Sample type

RNA

Channel 1

Source name

Inflorescences of ag-1;35S::AG-GR plants treated for 10 hours with a dexamethasone-containing solution

Organism

Arabidopsis thaliana

Extracted molecule

total RNA

Channel 2

Source name

Inflorescences of ag-1;35S::AG-GR plants treated for 10 hours with a control solution

Organism

Arabidopsis thaliana

Extracted molecule

total RNA

Description

Dye-labeled RNA samples derived from dexamethasone- or mock-treated inflorescences of ag-1;35S::AG-GR plants were co-hybridized to a cDNA array enriched for flower-specific transcripts.

Submission date

May 23, 2004

Last update date

May 27, 2005

Contact name

Frank Wellmer

E-mail(s)

[email protected]

Phone

626-395-8438

Organization name

California Institute of Technology

Department

Biology 156-29

Lab

Meyerowitz

Street address

1200 E. California Blvd.

City

Pasadena

State/province

ZIP/Postal code

91125

Country

USA

Platform ID

GPL1069

Series (1)

GSE1424

AGAMOUS-GR time-course experiment

Data table header descriptions
ID_REF
Intensity1	Absolute intensity measurement for the dexamethasone-treated sample after background subtraction and normalization
Intensity2	Absolute intensity measurement for the mock-treated sample after background subtraction and normalization
P-value	Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE	Log10 ratio (Intensity2 divided by Intensity1)
Flagged?	Indicates whether data from the array element were marked as failed during quality control procedures

Data table
ID_REF	Intensity1	Intensity2	P-value	VALUE	Flagged?
GP000A1	0.01806	0.02972	0.35922	0.24171	FALSE
GP000A2	0.00057	0.0012	0.64829	0.34611	FALSE
GP000A3	0.03783	0.0555	0.05827	0.19167	FALSE
GP000A4	0.01246	0.02803	0.02502	0.37737	FALSE
GP000B1	0.01303	0.02653	0.22271	0.33393	FALSE
GP000B2	0.01962	0.04375	0.18895	0.3735	FALSE
GP000B3	0.0213	0.02503	0.61619	0.09529	FALSE
GP000B4	0.01635	0.0173	0.81229	0.0498	FALSE
GP000C1	0.01936	0.05483	0.05667	0.47736	FALSE
GP000C2	0.01556	0.03441	0.22216	0.36998	FALSE
GP000C3	0.0083	0.01268	0.34877	0.20888	FALSE
GP000C4	0.18514	0.17419	0.98985	-0.00127	FALSE
GP000D1	0.01002	0.01987	0.06749	0.32244	FALSE
GP000D2	0.02143	0.02391	0.85384	0.07282	FALSE
GP000D3	0.05017	0.05332	0.81403	0.05161	FALSE
GP000D4	0.01418	0.01576	0.68585	0.07123	FALSE
GP000E1	0.00716	0.01388	0.0525	0.31259	FALSE
GP000E2			1		TRUE
GP000E3	0.01332	0.0197	0.60973	0.19529	FALSE
GP000E4	0.00315	0.00531	0.33962	0.25201	FALSE

Total number of rows: 10816

Table truncated, full table size 481 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM23595.GPR.gz	769.6 Kb	(ftp)(http)	GPR