|
| Status |
Public on Aug 31, 2008 |
| Title |
PrrA-PpsR-_DDMSO_1 |
| Sample type |
RNA |
| |
|
| Source name |
Rhodobacter sphaeroides PrrA-PpsR-
|
| Organism |
Cereibacter sphaeroides 2.4.1 |
| Characteristics |
Anaerobic dark DMSO conditions:
Sparging with 95% N2, 5% CO2 in the dark
Sistrom minimal medium A supplemented with final concentration of 0.1% YE and 0.5% DMSO
|
| Extracted molecule |
total RNA |
| Extraction protocol |
According to Roh et al., 2004
|
| Label |
biotin
|
| Label protocol |
According to Affymetrix protocol
|
| |
|
| Hybridization protocol |
According to Affymetrix protocol
|
| Scan protocol |
According to Affymetrix protocol
|
| Description |
Anaerobic dark DMSO conditions
|
| Data processing |
Scanned image was analyzed using the Affymetrix Microarray Suite 5.0 (MAS5, Affymetrix Inc.) to obtain signal value, detection calls (present/marginal/absent) and p values
|
| |
|
| Submission date |
Nov 06, 2007 |
| Last update date |
Aug 14, 2011 |
| Contact name |
patrice bruscella |
| Organization name |
University of Texas Health Science Center
|
| Department |
Microbiology and Molecular Genetics
|
| Street address |
6431 Fannin
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platform ID |
GPL162 |
| Series (1) |
| GSE9534 |
Digging deeper into the PpsR regulon of Rhodobacter sphaeroides |
|
