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GEO accession:
Sample GSM247883
Query DataSets for GSM247883
Status
Public on Jun 04, 2008
Title
Cervical cancer_CaCx54
Sample type
RNA
Source name
Cervical cancer_CaCx54
Organism
Homo sapiens
Characteristics
Cervical cancer, squamous cell carcinoma, microdissected, age 82, HPV 16
Biomaterial provider
Columbia University Medical Center
Treatment protocol
None
Growth protocol
None
Extracted molecule
total RNA
Extraction protocol
TRIzol
Label
biotin
Label protocol
Affymetrix
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
Cervical cancer, microdissected squamous cell carcinoma
Data processing
GCOS
Submission date
Dec 07, 2007
Last update date
Feb 26, 2020
Contact name
Murty Vundavalli
E-mail(s)
[email protected]
Phone
(212) 851-4621
Fax
(212) 305-5498
Organization name
Columbia University Medical Center
Department
Pathology
Lab
Cancer Cytogenetics
Street address
1130 St Nicholas Ave
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL96
Series (1)
GSE9750
Identification of gene expression profiles in cervical cancer
Relations
Reanalyzed by
GSE145976
Data table header descriptions
ID_REF
VALUE
score
Data table
ID_REF
VALUE
AFFX-BioB-5_at
291.3
AFFX-BioB-M_at
564.8
AFFX-BioB-3_at
325
AFFX-BioC-5_at
1322.2
AFFX-BioC-3_at
942.6
AFFX-BioDn-5_at
1381.2
AFFX-BioDn-3_at
5652.6
AFFX-CreX-5_at
8526.6
AFFX-CreX-3_at
13734.4
AFFX-DapX-5_at
7.3
AFFX-DapX-M_at
26.4
AFFX-DapX-3_at
4.2
AFFX-LysX-5_at
10.8
AFFX-LysX-M_at
35.4
AFFX-LysX-3_at
8.6
AFFX-PheX-5_at
4.2
AFFX-PheX-M_at
8
AFFX-PheX-3_at
47.1
AFFX-ThrX-5_at
4.5
AFFX-ThrX-M_at
31.7
Total number of rows:
22283
Table truncated, full table size
353 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM247883.CEL.gz
2.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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