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| Status |
Public on Apr 16, 2018 |
| Title |
OME1 |
| Sample type |
SRA |
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| Source name |
Adult Omental fat
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| Organism |
Homo sapiens |
| Characteristics |
tissue: omental fat
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| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen miRNeasy Mini Kit
NEBNext® Ultra™ Directional RNA Library Prep Kit
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 2000 |
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| Data processing |
Reads were aligned to Hg19, using Tophat (version tophat-2.0.11) and genes were quantified using Cufflinks (Version 2.1.1)
Genome_build: Hg19
Supplementary_files_format_and_content: FPKM
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| Submission date |
Mar 29, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Lei Sun |
| E-mail(s) |
[email protected]
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| Organization name |
Duke-NUS
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| Street address |
8 College Road
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| City |
Singapore |
| ZIP/Postal code |
169857 |
| Country |
Singapore |
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| Platform ID |
GPL11154 |
| Series (1) |
| GSE97205 |
De novo reconstruction of human adipose reveals conserved lncRNAs as regulators of brown adipogenesis |
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| Relations |
| BioSample |
SAMN06652337 |
| SRA |
SRX2683729 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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