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Status
Public on Dec 03, 2004
Title
PGA-N-1303
Sample type
RNA
Source name
Heart biopsy
Organism
Homo sapiens Extracted molecule
total RNA
Description
LV biopsies in patients (pts) with LV hypertrophy (H) due to aortic stenosis (AS, n=9) and in congestive cardiomyopathy (CCMP,n=6) pts. Pts with coronary artery disease and normal LV function served as controls (C,n=4). LV biopsies were obtained at cardiac catheterization in CCMP pts and at cardiac surgery in AS and C pts.
Submission date
Jun 18, 2004
Last update date
Mar 16, 2009
Contact name
Martina Schinke
URL
http://www.cardiogenomics.org Organization name
Harvard University
Department
Bauer Center for Genomic Research
Lab
Cardiogenomics
Street address
7 Divinity Ave
City
Cambridge
State/province
MA
ZIP/Postal code
02138
Country
USA
Platform ID
GPL8300 Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
52.4
A
0.645547
AFFX-MurIL10_at
47.3
A
0.631562
AFFX-MurIL4_at
42
A
0.645547
AFFX-MurFAS_at
32.5
A
0.340648
AFFX-BioB-5_at
440.2
P
0.028457
AFFX-BioB-M_at
539.7
P
0.015183
AFFX-BioB-3_at
382.9
M
0.058444
AFFX-BioC-5_at
1265.1
P
0.000225
AFFX-BioC-3_at
916.2
P
0.000195
AFFX-BioDn-5_at
924.1
P
0.000662
AFFX-BioDn-3_at
8127.7
P
0.000195
AFFX-CreX-5_at
8187
P
0.000044
AFFX-CreX-3_at
14520
P
0.000044
AFFX-BioB-5_st
235.3
A
0.250796
AFFX-BioB-M_st
75.8
A
0.51489
AFFX-BioB-3_st
53.2
A
0.883887
AFFX-BioC-5_st
28.2
A
0.868639
AFFX-BioC-3_st
18.8
A
0.749204
AFFX-BioDn-5_st
20.2
A
0.559354
AFFX-BioDn-3_st
86.4
A
0.470241
12625 315 Kbytes .Supplementary file Size Download File type/resource GSM25800_JB-n_1303.cel.gz
2.8 Mb
(ftp) (http) CEL
Processed data included within Sample table
