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Sample GSM2590365 Query DataSets for GSM2590365
Status Public on Nov 02, 2017
Title SMARCB1+ day7 2
Sample type RNA
 
Source name I2A SMARCB1-reexpressed cell line
Organism Homo sapiens
Characteristics genotype/variation: I2A SMARCB1-reexpressed
tissue: rhabdoid tumor cell line
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description MM27_ARN0011_s2h1_C07_hGene2.1
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Apr 27, 2017
Last update date Jan 23, 2018
Contact name Wilfrid Richer
E-mail(s) [email protected]
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL19264
Series (1)
GSE98277 High-Throughput Drug Screening identifies Pazopanib and Clofilium tosylate as effective treatments for malignant rhabdoid tumors

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 2.440816245
10_at 2.449794897
100_at 3.319037402
1000_at 2.456608898
10000_at 6.115334544
100009613_at 2.449187647
100009676_at 2.44026777
10001_at 4.014028034
10002_at 2.445626736
10003_at 2.452026863
100033413_at 6.026323136
100033422_at 2.457711088
100033423_at 2.449332665
100033424_at 2.448339425
100033425_at 2.454118534
100033426_at 10.49374394
100033427_at 11.96198641
100033428_at 2.455622811
100033430_at 2.454901659
100033431_at 2.954454552

Total number of rows: 24092

Table truncated, full table size 502 Kbytes.




Supplementary file Size Download File type/resource
GSM2590365_MM27_ARN0011_s2h1_C07_hGene2.1.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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