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GEO accession:
Sample GSM262259
Query DataSets for GSM262259
Status
Public on Jun 23, 2008
Title
30 min IL-3 stimulated BaF3 cells + ctrl SiRNA_U74A
Sample type
RNA
Source name
BaF3 cells
Organism
Mus musculus
Characteristics
BaF3 cells + ctrl SiRNA stimulated with IL-3
Extracted molecule
total RNA
Extraction protocol
RNeasy Maxi kit, including an on-column DNase I treatment (Qiagen)
Label
biotinylation
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
na
Data processing
MAS5.0
Submission date
Feb 04, 2008
Last update date
Jun 23, 2008
Contact name
Anne Rascle
E-mail(s)
[email protected]
Phone
+49 (0)941 2806598
Organization name
University of Regensburg
Street address
Universitaetsstrasse
City
Regensburg
ZIP/Postal code
93053
Country
Germany
Platform ID
GPL81
Series (1)
GSE10389
Identification of Stat5 Target Genes by siRNA-mediated knockdown
Data table header descriptions
ID_REF
VALUE
value
ABS_CALL
absent call
DETECTION P-VALUE
detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
4.12235
A
0.921998
AFFX-MurIL10_at
3.17455
A
0.559354
AFFX-MurIL4_at
11.8524
P
0.0200219
AFFX-MurFAS_at
39.2037
P
0.00556451
AFFX-BioB-5_at
108.497
P
0.0044838
AFFX-BioB-M_at
209.42
P
4.42873e-05
AFFX-BioB-3_at
92.0066
P
0.00010954
AFFX-BioC-5_at
313.969
P
0.000169227
AFFX-BioC-3_at
250.548
P
4.42873e-05
AFFX-BioDn-5_at
323.988
P
4.42873e-05
AFFX-BioDn-3_at
1846.3
P
0.00010954
AFFX-CreX-5_at
2990.78
P
4.42873e-05
AFFX-CreX-3_at
5671.26
P
4.42873e-05
AFFX-BioB-5_st
11.2795
A
0.313723
AFFX-BioB-M_st
7.9524
A
0.617401
AFFX-BioB-3_st
7.28856
A
0.794268
AFFX-BioC-5_st
3.54498
A
0.904333
AFFX-BioC-3_st
1.67309
A
0.876428
AFFX-BioDn-5_st
53.331
A
0.156732
AFFX-BioDn-3_st
35.5614
A
0.0676785
Total number of rows:
12488
Table truncated, full table size
366 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM262259.CEL.gz
2.8 Mb
(ftp)
(http)
CEL
GSM262259.CHP.gz
4.8 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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