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Sample GSM2673102 Query DataSets for GSM2673102
Status Public on Jun 16, 2020
Title 4487653375_D: whole blood-TB-PTB
Sample type RNA
 
Source name whole blood-TB-PTB
Organism Homo sapiens
Characteristics tissue: whole blood
dataset: TB
sample class: PTB
Extracted molecule total RNA
Extraction protocol RNA was extracted with MagMAX™ RNA Isolation Kit
Label biotin
Label protocol biotin Biotinylated cRNA were prepared with the Illumina® TotalPrep-96 RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol tandard Illumina scanning protocol with BeadArray Reader 500X
Data processing The data were normalised using average normalization with Genome Studio
 
Submission date Jun 19, 2017
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6884
Series (2)
GSE100150 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring
GSE100166 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (TB Datasets)

Data table header descriptions
ID_REF
VALUE The data were normalised using average normalization with Genome Studio
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 10.8758 0.1133
ILMN_1711886 113.9019 0
ILMN_1759828 22.8266 0.0198
ILMN_1674376 6.6658 0.1976
ILMN_1711888 9.8091 0.1318
ILMN_2111932 -2.4887 0.5784
ILMN_1686362 9.8914 0.1304
ILMN_1723874 1493.9603 0
ILMN_1662391 18.4717 0.0422
ILMN_1662390 1.1591 0.4005
ILMN_1686361 3.8793 0.2899
ILMN_1686360 16.5013 0.054
ILMN_1723871 68.2932 0.0013
ILMN_2086417 820.123 0
ILMN_1686367 2851.7317 0
ILMN_1662397 -7.8546 0.8011
ILMN_1721218 -5.8569 0.7391
ILMN_1711883 -0.4979 0.4809
ILMN_2351611 178.5573 0
ILMN_1674373 17.7001 0.0448

Total number of rows: 48803

Table truncated, full table size 1282 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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