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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T00_NC_03
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
[email protected]
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.727714
293.5
298.839
73
73.0532
1307.5
1307.68
37
37.5319
2
0
79
80.7213
72
72.0804
63
63
37
36.7902
3
-0.30843
272
275.356
72
71.5355
497
484.831
36
36.117
4
0.0130683
669.5
671.683
73
72.2117
667.5
668.633
36
35.8796
5
-0.607371
183
183.081
71
71.4876
505
510.726
35
35.6466
6
0.0631564
196.5
199.81
71
71.1558
172.5
171.103
36
35.9167
7
-0.966064
213
208.534
73
73.1792
1350.5
1340.09
36
35.767
8
0.131171
235
238.492
74
73.8269
181
183.393
35
35.3569
9
-0.0265396
87
86.7818
73
73.4244
76
76.9636
34
34.7897
10
0.108004
260
262.733
71
71.5897
213
212.3
35
35.3114
11
0.0756539
158
156.508
72
71.8949
133
130.085
35
35.6667
12
0.0650727
119
122.673
72
71.9234
103
103.636
35
35.2774
13
0.0591862
299
298.492
71.5
71.8706
262
262.966
34.5
35.0804
14
-1.07568
172
173.857
73
73.6022
1256.5
1263.91
35
35.4409
15
-0.183213
116
114.918
73
73.9039
119
118.328
35
35.1673
16
0.126912
132
131.286
73
73.4876
104
104.232
36
35.8481
17
-0.013564
110
110.105
74.5
74.6408
97
96.7368
36
35.5458
18
0.0452865
353.5
354.917
74
73.4326
322
322.783
35.5
35.7128
19
0.031809
273
275.509
72
72.4599
253
253.283
35
35.6098
20
0.10206
137
137.661
73
73.3958
111
111.22
36
35.8993
Total number of rows: 21446 Table truncated, full table size 1306 Kbytes .Supplementary data files not provided