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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T08_NC_01
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
[email protected]
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.0892148
947
959.226
72
71.7179
2188
2161.39
33
32.9853
2
0
80
80.6071
71
71.605
70.5
71.0536
33
32.758
3
-0.205012
327
329.421
71
71.0106
898
900.965
33
32.6537
4
-0.185847
417
417.527
70
70.4476
1106
1104.96
32
32.8427
5
-0.572216
185
187.068
71
70.9821
966
966.661
32
32.5571
6
0.255874
232
229.912
71
70.6691
266
266.86
32
32.2945
7
-0.975442
125
124.915
71
71.0947
1066
1098.68
33
32.5263
8
0.132698
95.5
99.6333
70.5
70.6036
104.5
105.9
32
32.1036
9
0
79
79.4464
71
70.8676
80
79.3036
32
32.5401
10
-0.0325067
200
200.473
71
71.0612
373
375.945
32
32.3777
11
0.123981
270
317.85
70
70.9113
420
465.65
32
32.5922
12
0.116634
717.5
893.283
71
71.383
1080
1266.82
33
32.9716
13
0.0748365
591
595.132
71
71.1838
926
922.792
33
33.136
14
-0.968396
127
128.053
72
72.6777
1104
1113.61
33
33.5934
15
-0.188581
111
110.407
74
73.5035
182
181.932
35
35.1738
16
-0.120423
96
98.4407
74
73.9474
125
125.847
35
35.4947
17
-0.437618
89
89.4107
73
74.3609
125
125.268
35.5
35.8233
18
0.391057
357
357.852
73
73.797
327
325.148
36
36.1241
19
0.0356168
332
335.492
75
74.8849
575
575.746
36
36.5612
20
-0.079747
122
122.922
74
73.669
198
194.882
37
36.6725
Total number of rows: 21446 Table truncated, full table size 1300 Kbytes .Supplementary data files not provided