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GEO accession:
Sample GSM27348
Query DataSets for GSM27348
Status
Public on Jul 27, 2004
Title
0.5A
Sample type
RNA
Source name
Rhodobacter sphaeroides 2.4.1
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
Growth at 0.5% O2, 1% CO2, 98.5% N2 in the dark. Cells are collected at OD 0.18. RNA was isolated with bead beater + RNeasy kits
Submission date
Jul 23, 2004
Last update date
May 27, 2005
Contact name
Mark Gomelsky
E-mail(s)
[email protected]
Phone
307-766-3522
Organization name
University of Wyoming
Department
Molecular Biology
Lab
Gomelsky
Street address
City
Laramie
State/province
WY
ZIP/Postal code
82071
Country
USA
Platform ID
GPL162
Series (2)
GSE1515
PpsR regulon in Rhodobacter sphaeroides
GSE7004
Oxygen-dependent transcriptome profiling in R.sphaeroides 2.4.1 in the dark
Data table header descriptions
ID_REF
VALUE
relative signal of expression
ABS_CALL
Present if p<0.04 Absent if p>0.06 Marginal if 0.04 < p < 0.06
DETECTION P-VALUE
stat. significance of detection
Stat Pairs
pairs of PM-MM present on chip
Stat Pairs Used
pairs of PM-MM used in analysis
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
8.7
A
0.703191
14
14
2
6.1
A
0.562354
14
14
3
5.6
A
0.641391
20
19
4
20
A
0.313723
20
20
5
20.5
A
0.123572
20
20
6
1.5
A
0.916408
20
20
7
17
A
0.195266
20
20
8
22.9
A
0.37375
20
19
9
18.8
A
0.532074
20
19
10
8.7
A
0.368438
20
20
11
0.8
A
0.699409
20
20
12
1
A
0.470241
20
20
13
1.6
A
0.327079
20
20
14
0.3
A
0.997133
20
20
15
2.3
A
0.51489
20
20
16
0.9
A
0.420267
20
19
17
18.2
M
0.045498
20
19
18
8.8
A
0.832931
20
19
19
0.6
A
0.617401
20
20
20
0.8
A
0.760937
20
20
Total number of rows:
5355
Table truncated, full table size
143 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM27348.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
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