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Sample GSM275315 Query DataSets for GSM275315
Status Public on Mar 04, 2009
Title WT 1 1508
Sample type RNA
 
Source name WT 1 1508
Organism Mus musculus
Characteristics wild type
Extracted molecule total RNA
Extraction protocol RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
Label biotin
Label protocol biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
 
Hybridization protocol Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
Scan protocol GeneChips were scanned using the Affymetric Gene-Array scanner 3000
Description Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
Data processing The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
 
Submission date Mar 14, 2008
Last update date Aug 28, 2018
Contact name Michael P Lisanti
E-mail(s) [email protected]
Organization name Thomas Jefferson University
Department Cancer Biology
Lab Cancer Biology
Street address 233 S. 10th St BLSB 939
City Philadelphia
State/province PA
ZIP/Postal code 19107
Country USA
 
Platform ID GPL1261
Series (2)
GSE10848 Caveolin-3 Knockout Hearts
GSE10849 Caveolin-1 Knockout Hearts
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA Normalization by GeneSpring GX v7.3

Data table
ID_REF VALUE
1415670_at 318.03918
1415671_at 733.33203
1415672_at 931.7391
1415673_at 83.03066
1415674_a_at 387.04425
1415675_at 150.83115
1415676_a_at 1776.0536
1415677_at 434.49997
1415678_at 1707.6053
1415679_at 1212.7538
1415680_at 340.58707
1415681_at 719.264
1415682_at 162.84482
1415683_at 1477.5428
1415684_at 184.694
1415685_at 355.38437
1415686_at 346.61533
1415687_a_at 5256.7705
1415688_at 1507.4983
1415689_s_at 237.81403

Total number of rows: 45101

Table truncated, full table size 927 Kbytes.




Supplementary file Size Download File type/resource
GSM275315.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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