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GEO accession:
Sample GSM277553
Query DataSets for GSM277553
Status
Public on Mar 29, 2008
Title
SW480 Trichostatin A 100nM (1855529041_C)
Sample type
RNA
Source name
1855529041_C
Organism
Homo sapiens
Characteristics
colon cell line
Extracted molecule
total RNA
Extraction protocol
standard Illumina protocol
Label
Cy3
Label protocol
standard Illumina protocol
Hybridization protocol
standard Illumina protocol
Scan protocol
standard Illumina protocol
Description
SW480 TSA
Colon cancer cell line
Data processing
BeadStudio GX 3.2
Submission date
Mar 26, 2008
Last update date
Mar 28, 2008
Contact name
qiang yu
E-mail(s)
[email protected]
Organization name
GIS
Street address
BIOPOLIS STREET
City
SINGAPORE
ZIP/Postal code
138672
Country
Singapore
Platform ID
GPL6104
Series (2)
GSE10952
Gene expression in colon cancer cell lines
GSE10972
Colon cancer
Data table header descriptions
ID_REF
VALUE
cubic spline normalization
Avg_NBEADS
BEAD_STDERR
Detection Pval
Data table
ID_REF
VALUE
Avg_NBEADS
BEAD_STDERR
Detection Pval
ILMN_1343291
73096.1
133
971.8621
0
ILMN_1343292
16672.68
112
292.8342
0
ILMN_1343293
48492.64
141
681.295
0
ILMN_1343294
65652.97
131
938.4567
0
ILMN_1651209
36.30659
39
6.205592
0.001436782
ILMN_1651217
2.765616
34
5.051219
0.3936782
ILMN_1651228
46020.5
41
1049.703
0
ILMN_1651229
453.6779
55
23.03756
0
ILMN_1651234
-7.62264
43
4.150794
0.6781609
ILMN_1651235
11.90587
53
5.727086
0.1609195
ILMN_1651236
19.62971
57
4.90546
0.07902299
ILMN_1651237
3308.006
28
109.1628
0
ILMN_1651238
-1.712203
38
4.93709
0.5186782
ILMN_1651254
6628.594
42
164.4817
0
ILMN_1651259
59.42789
28
8.882992
0
ILMN_1651260
15.19215
36
5.581016
0.1293103
ILMN_1651261
842.7924
32
38.64802
0
ILMN_1651262
27491.22
39
769.2747
0
ILMN_1651268
33.4664
47
5.528109
0.002873563
ILMN_1651278
1102.12
40
36.99881
0
Total number of rows:
22184
Table truncated, full table size
857 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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