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Sample GSM29003 Query DataSets for GSM29003
Status Public on Dec 01, 2005
Title Hs 683 glioma cell lines 24hrs time point
Sample type RNA
 
Source name Human Brain (Hs 683) glioma cell lines treated with 300nM of candoxin and incubated for 24 hrs
Organism Homo sapiens
Extracted molecule total RNA
 
Description Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-3
 
Submission date Aug 14, 2004
Last update date Oct 28, 2005
Contact name Pachiappan Arjunan
Organization name NUS, NIH, GRU
Department Anatomy, Unit on Retinal Vascular Neurobiology, BMB
Lab VTRP, URVN, BMB
Street address 1120 15th ST, Laney walker Blvd,
City Augusta
State/province Georgia
ZIP/Postal code 30904
Country USA
 
Platform ID GPL96
Series (1)
GSE1682 Global gene expression analysis of human glioma (Hs 683) cell lines exposed to candoxin

Data table header descriptions
ID_REF
VALUE raw signal intensity
ABS_CALL present, absent, marginal
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-TrpnX-M_at 6.3 A 0.932322
AFFX-TrpnX-5_at 7.8 A 0.559354
AFFX-TrpnX-3_at 3.8 A 0.860518
AFFX-ThrX-M_at 49.6 A 0.275146
AFFX-ThrX-5_at 11 A 0.794268
AFFX-ThrX-3_at 12 A 0.891021
AFFX-r2-P1-cre-5_at 15573.6 P 0.000244
AFFX-r2-P1-cre-3_at 18056.4 P 0.000244
AFFX-r2-Hs28SrRNA-M_at 64.2 A 0.466064
AFFX-r2-Hs28SrRNA-5_at 22.9 A 0.633789
AFFX-r2-Hs28SrRNA-3_at 137.8 A 0.246094
AFFX-r2-Hs18SrRNA-M_x_at 94.8 A 0.303711
AFFX-r2-Hs18SrRNA-5_at 20.3 A 0.780518
AFFX-r2-Hs18SrRNA-3_s_at 298.4 A 0.149658
AFFX-r2-Ec-bioD-5_at 2764.7 P 0.000244
AFFX-r2-Ec-bioD-3_at 3095.4 P 0.000244
AFFX-r2-Ec-bioC-5_at 842 P 0.000244
AFFX-r2-Ec-bioC-3_at 887.2 P 0.000244
AFFX-r2-Ec-bioB-M_at 440.7 P 0.000244
AFFX-r2-Ec-bioB-5_at 340.9 P 0.000732

Total number of rows: 22283

Table truncated, full table size 593 Kbytes.




Supplementary data files not provided

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