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Sample GSM29005 Query DataSets for GSM29005
Status Public on Dec 01, 2005
Title Hs 683 glioma cell lines 48hrs-2 time point
Sample type RNA
 
Source name Human Brain (Hs 683) glioma cell lines treated with 300nM of candoxin and incubated for 48 hrs
Organism Homo sapiens
Extracted molecule total RNA
 
Description Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-2
 
Submission date Aug 14, 2004
Last update date Oct 28, 2005
Contact name Pachiappan Arjunan
Organization name NUS, NIH, GRU
Department Anatomy, Unit on Retinal Vascular Neurobiology, BMB
Lab VTRP, URVN, BMB
Street address 1120 15th ST, Laney walker Blvd,
City Augusta
State/province Georgia
ZIP/Postal code 30904
Country USA
 
Platform ID GPL96
Series (1)
GSE1682 Global gene expression analysis of human glioma (Hs 683) cell lines exposed to candoxin

Data table header descriptions
ID_REF
VALUE raw signal intensity
ABS_CALL present, absent, marginal
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-TrpnX-M_at 17.9 A 0.897835
AFFX-TrpnX-5_at 11.3 A 0.783476
AFFX-TrpnX-3_at 3.4 A 0.957038
AFFX-ThrX-M_at 50.3 A 0.250796
AFFX-ThrX-5_at 12.1 A 0.712257
AFFX-ThrX-3_at 11.1 A 0.824672
AFFX-r2-P1-cre-5_at 18395.8 P 0.000244
AFFX-r2-P1-cre-3_at 21719 P 0.000244
AFFX-r2-Hs28SrRNA-M_at 30.4 A 0.398926
AFFX-r2-Hs28SrRNA-5_at 10.9 A 0.888428
AFFX-r2-Hs28SrRNA-3_at 21.8 A 0.753906
AFFX-r2-Hs18SrRNA-M_x_at 10.6 A 0.932373
AFFX-r2-Hs18SrRNA-5_at 5.7 A 0.994141
AFFX-r2-Hs18SrRNA-3_s_at 48.7 A 0.567627
AFFX-r2-Ec-bioD-5_at 3937 P 0.000244
AFFX-r2-Ec-bioD-3_at 4304.7 P 0.000244
AFFX-r2-Ec-bioC-5_at 1156.2 P 0.000244
AFFX-r2-Ec-bioC-3_at 1190 P 0.000244
AFFX-r2-Ec-bioB-M_at 448.3 P 0.000244
AFFX-r2-Ec-bioB-5_at 317.2 P 0.001953

Total number of rows: 22283

Table truncated, full table size 593 Kbytes.




Supplementary data files not provided

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