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Sample GSM30017 Query DataSets for GSM30017
Status Public on Sep 04, 2004
Title F1340-I7 versus pool
Sample type RNA
 
Channel 1
Source name F1340-I7
Organism Homo sapiens
Characteristics ped.id: 1340
person.id: 7
Description: CEPH 1340 SON GM07342
Biomaterial provider Coriell Cell Repositories identifier GM07342
(http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07342)
Extracted molecule total RNA
 
Channel 2
Source name pool
Organism Homo sapiens
Characteristics A common pool created from equal portions of RNA from all samples.
Biomaterial provider Coriell (http://www.coriell.org/)
Extracted molecule total RNA
 
 
Description Lymphoblastoid cell lines were obtained from Coriell Repositories.
Sample identifiers consist of the family identifier and individual identifier for the sample source.
All individuals were compared to a common pool created from equal portions of RNA from all samples.
See Monks, et al., American Journal of Human Genetics (2004) for details.
 
Submission date Sep 03, 2004
Last update date Nov 21, 2008
Contact name Stephen W Edwards
E-mail(s) [email protected]
Phone 425 636 6409
URL http://www.rii.com
Organization name Rosetta Inpharmatics (Merck & Co.)
Department Research Genetics
Street address
City Seattle
State/province WA
ZIP/Postal code 98034
Country USA
 
Platform ID GPL564
Series (1)
GSE1726 Rosetta_Merck_CEPH_Study

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE MLRATIO: Averaged log10 ratio [log10(CHANNEL1/CHANNEL2), error weighted]
LOGINTENSITY Average log intensity of channels
PVALUE P-value of LogRatio
MLRATIOERROR Error estimate for MLRATIO (VALUE)

Data table
ID_REF VALUE LOGINTENSITY PVALUE MLRATIOERROR
10012684492 7.5100000000000002E-3 -1.16978 0.94601849959999995 0.11094999999999999
10012679250 -0.10038999999999999 -1.7178899999999999 0.62723536820000003 0.20671999999999999
10017961237 -0.20268 -0.42276999999999998 5.3786961999999997E-3 7.2819999999999996E-2
10012681431 0.13980000000000001 -1.3596600000000001 0.32961699840000003 0.1434
10012682280 0.00157 -1.65245 0.99329611399999995 0.18708
10012679330 1.1199999999999999E-3 -1.4366699999999999 0.99178768880000001 0.10897999999999999
10012666020 0.19980999999999999 -1.3110299999999999 3.3693612999999997E-2 9.4089999999999993E-2
10012666532 6.8830000000000002E-2 -1.6412599999999999 0.70932425440000002 0.18464
10012668909 0.10052999999999999 -0.43391999999999997 3.9284173499999998E-2 4.8770000000000001E-2
10012675176 0.21004 -0.74961 0.0038339613 7.2639999999999996E-2
10012666129 -0.10553 -0.54022000000000003 8.3345264700000005E-2 6.0940000000000001E-2
10012667359 0.23995 -2.11049 0.55645208710000005 0.40799999999999997
10012685183 -0.22373000000000001 -1.23034 5.7220578000000003E-3 0.08097
10012668951 -0.17005000000000001 -1.2836000000000001 0.34067349139999997 0.17846000000000001
10012669544 0.10052999999999999 -1.1429 0.29747565050000002 9.6490000000000006E-2
10012678741 0.22892999999999999 -1.45892 0.1323546817 0.15212999999999999
10012674019 3.4290000000000001E-2 -1.85995 0.89268487679999997 0.25419999999999998
10012683076 9.2429999999999998E-2 -1.6850400000000001 0.60119052070000001 0.17684
10012689072 1.0189999999999999E-2 -4.7550000000000002E-2 0.81858047960000002 4.4420000000000001E-2
10012686248 0.11684 -1.7817799999999999 0.62182930489999999 0.23687

Total number of rows: 23880

Table truncated, full table size 1960 Kbytes.




Supplementary data files not provided
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