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Sample GSM305470 Query DataSets for GSM305470
Status Public on Jul 15, 2008
Title E2
Sample type RNA
 
Source name CMPCs
Organism Homo sapiens
Characteristics cardiomyocyte progenitor cells (CMPCs), ScaI+ cells isolated from human fetal heart
Extracted molecule total RNA
Extraction protocol NucleoSpin RNA II purification kit (Macherey Nagel)
Label Cy3
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Description Normal (not transduced)
Data processing Raw data normalized using global variance stabilization normalization (VSN)
 
Submission date Jul 14, 2008
Last update date Jul 14, 2008
Contact name John van Tuyn
E-mail(s) [email protected]
Organization name Leiden university Medical Center
Department Cardiology
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333ZA
Country Netherlands
 
Platform ID GPL6104
Series (1)
GSE12110 Gene expression profiling of overexpression of myocardin

Data table header descriptions
ID_REF
VALUE Raw data normalized using global variance stabilization normalization (VSN)
Raw Signal
Detection Pval
BEAD_STDEV
Avg_NBEADS

Data table
ID_REF VALUE Raw Signal Detection Pval BEAD_STDEV Avg_NBEADS
ILMN_1804663 145.0113857 257.9397 0.001412429 10.25297 48
ILMN_1651799 7206.250534 7929.373 0 272.1242 38
ILMN_1782558 8.866806824 94.08012 0.8446327 3.562497 37
ILMN_1812262 387.1208608 521.5865 0 16.54127 36
ILMN_1712803 791.4862081 961.0356 0 28.40168 37
ILMN_1774757 40.51906302 141.7506 0.04943503 3.782948 34
ILMN_1712730 58.34346255 162.2499 0.01271186 6.064193 44
ILMN_1813561 13.15922371 104.2913 0.5607345 3.724794 50
ILMN_1761511 16.11290392 109.6008 0.4237288 4.196198 39
ILMN_1815941 1529.001086 1762.268 0 50.30582 43
ILMN_1711451 12.0161912 101.9594 0.6355932 3.809718 27
ILMN_1728255 16.58667039 110.3828 0.3968927 3.844554 52
ILMN_1723582 32.25905354 131.8249 0.07488669 3.811085 54
ILMN_1796374 54.50100733 157.8937 0.01553672 4.670475 53
ILMN_1713272 10.64054259 98.84235 0.7372881 4.532644 37
ILMN_1674380 489.3068814 632.6695 0 18.84437 47
ILMN_1660582 393.4807907 528.5014 0 16.06628 44
ILMN_1717492 22.21128519 118.7953 0.2372881 4.483743 49
ILMN_1811370 8.895488227 94.16612 0.8389831 4.820073 36
ILMN_1652243 29.60846569 128.5271 0.1299435 4.00933 43

Total number of rows: 20589

Table truncated, full table size 1075 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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