|
| Status |
Public on Jul 19, 2008 |
| Title |
DNA control 2 |
| Sample type |
genomic |
| |
|
| Source name |
DNase treated genomic DNA
|
| Organism |
Saccharomyces cerevisiae |
| Characteristics |
Strain BY4741
|
| Growth protocol |
Grown in YPD to mid-log phase at 30 C
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Chromatin was digested with micrococcal nuclease to yield predominantly mononucleosomal DNA
|
| Label |
Biotin
|
| Label protocol |
biotinylated with Biotin-N6-ddATP using terminal deoxynucleotidyl transferase
|
| |
|
| Hybridization protocol |
Per Affymetrix recommendation
|
| Scan protocol |
Scanned using Affymetrix 7G scanner
|
| Description |
none
|
| Data processing |
CEL and GRD files created from Affymetrix GCOS software; Affymetrix Tiling Array Software used to create .bar files
|
| |
|
| Submission date |
Jul 18, 2008 |
| Last update date |
Jul 18, 2008 |
| Contact name |
Randall Heywood Morse |
| E-mail(s) |
[email protected]
|
| Phone |
518 486-3116
|
| Fax |
518 474-3181
|
| URL |
http://www.wadsworth.org/resnres/bios/morse.htm
|
| Organization name |
Wadsworth Center
|
| Lab |
Developmental Genetics
|
| Street address |
|
| City |
Albany |
| State/province |
NY |
| ZIP/Postal code |
12201-2002 |
| Country |
USA |
| |
|
| Platform ID |
GPL7070 |
| Series (1) |
| GSE12163 |
Nucleosome occupancy in wild type and histone H3(A111G) yeast |
|
