NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM3152482 Query DataSets for GSM3152482
Status Public on Jul 16, 2019
Title MDS patient#092
Sample type RNA
 
Source name MDS patient
Organism Homo sapiens
Characteristics subject status: MDS patient#092
subject id: Myelodysplastic syndromes (MDS)
tissue: bone marrow
cell type: mononucleated cells
Treatment protocol not applicable
Growth protocol Mononucleated cells from the bone marrow samples of the MDS patients and the healthy controls
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
 
Hybridization protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Scan protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Description MDS1284_(HTA-2_0)
Data processing Data were processed using Expression Console software with RMA normalization.
probe group file: HTA-2_0.r3.pgf
meta-probeset file: HTA-2_0.r3.Psrs.mps
 
Submission date May 24, 2018
Last update date Jul 16, 2019
Contact name Huai-Hsuan Huang
E-mail(s) [email protected]
Organization name National Taiwan University Hospital
Department Internal Medicine
Street address No.7, Chong-Shan South Road, Zhongzheng Dist.
City Taipei City
State/province Taiwan
ZIP/Postal code 100
Country Taiwan
 
Platform ID GPL17586
Series (1)
GSE114869 Long non-coding RNA HOXB-AS3 promotes myeloid cell proliferation and its higher expression is an adverse prognostic marker in myeloid malignancies [MDS_normal]

Data table header descriptions
ID_REF
VALUE RMA normalized gene level expression values from Expression Console software

Data table
ID_REF VALUE
TC01000001.hg.1 8.956291
TC01000002.hg.1 4.017666
TC01000003.hg.1 3.538607
TC01000004.hg.1 4.460071
TC01000005.hg.1 12.23887
TC01000006.hg.1 17.64108
TC01000007.hg.1 16.97539
TC01000008.hg.1 8.947688
TC01000009.hg.1 3.744214
TC01000010.hg.1 3.077924
TC01000011.hg.1 6.410185
TC01000012.hg.1 5.046379
TC01000013.hg.1 15.63643
TC01000014.hg.1 5.003064
TC01000015.hg.1 5.630936
TC01000016.hg.1 6.953657
TC01000017.hg.1 4.175929
TC01000018.hg.1 9.728313
TC01000019.hg.1 5.24331
TC01000020.hg.1 4.584305

Total number of rows: 70523

Table truncated, full table size 1724 Kbytes.




Supplementary file Size Download File type/resource
GSM3152482_MDS1284_HTA-2_0_.CEL.gz 23.3 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap