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GEO accession:
Sample GSM3274
Query DataSets for GSM3274
Status
Public on Apr 19, 2003
Title
100W_3_Nov02
Sample type
RNA
Source name
Rhodobacter sphaeroides 2.4.1
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
Illumination with tungsten bulbs at 100 W/m2.
Sparged with 95%N/5%CO2.
Harvested at 0.4 OD600.
Boiling lysis/hot phenol RNA extraction.
Submission date
Dec 21, 2002
Last update date
May 27, 2005
Contact name
Samuel Kaplan
E-mail(s)
[email protected]
Phone
713-500-5505
Fax
713-500-5499
URL
http://www.rhodobacter.org
Organization name
University of Texas Health Science Center at Houston
Department
Microbiology and Molecular Genetics
Street address
6431 Fannin, JFB 1.765
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platform ID
GPL162
Series (1)
GSE139
Effect of varying illumination
Data table header descriptions
ID_REF
Stat Pairs
pairs of PM-MM on chip
Stat Pairs Used
pairs of PM-MM used
VALUE
relative signal of expression
ABS_CALL
present if p<0.04, absent if p>0.06, marginal otherwise
DETECTION P-VALUE
stat signif of Abs call (detection)
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
DETECTION P-VALUE
1
14
14
8.9
A
0.681117
2
14
14
14.9
A
0.437646
3
20
20
4.6
A
0.971543
4
20
20
29.4
A
0.205732
5
20
20
22.2
A
0.440646
6
20
20
4
A
0.852061
7
20
20
16.1
A
0.48511
8
20
20
9.8
A
0.58862
9
20
20
23.9
A
0.58862
10
20
20
4.7
A
0.834139
11
20
20
2
A
0.262827
12
20
20
2.8
A
0.749204
13
20
20
1.5
A
0.544587
14
20
20
0.8
A
0.971543
15
20
20
0.6
A
0.686277
16
20
20
0.3
A
0.250796
17
20
20
16.4
A
0.239063
18
20
20
6.7
A
0.699394
19
20
20
3.8
A
0.737173
20
20
20
0.7
A
0.994435
Total number of rows:
5355
Table truncated, full table size
143 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3274.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
GSM3274.CHP.gz
1.9 Mb
(ftp)
(http)
CHP
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