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Sample GSM33508 Query DataSets for GSM33508
Status Public on Feb 28, 2005
Title msn2/4_Galactose_0.04_Generations_Replicate_2
Sample type RNA
 
Channel 1
Source name msn2/4_Galactose_0.04_Generations_Replicate_2
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name WT_Galactose_Reference
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Sparged, fermentor clutures of the <i>msn2/4</i> mutant strain were aerobically grown on galactose medium (SSG-TEA). At time zero (generation 0) the saprge gas was switched from air to O<sub>2</sub>-free N<sub>2</sub> and samples were harvested after 0 (aerobic control), 0.04, 0.08, 0.19, and 2 generations of anaerobic growth. 30 µg of total RNA was reverse transcribed (Cy3) and hybridized against a reference (Cy5), which consisted of a pool of equal masses of RNA from each time point sampled. The data are background-corrected and normalized.
 
Submission date Oct 26, 2004
Last update date Aug 22, 2008
Contact name Kurt E Kwast
E-mail(s) [email protected]
Phone 217-244-3122
Organization name University of Illinois at Urbana-Champaign
Department Molecular & Integrative Physiology
Lab Kwast Lab
Street address 407 S. Goodwin Ave.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platform ID GPL1535
Series (3)
GSE1879 aerobic_to_anaerobic_shift
GSE3705 JM43 cells grown aerobically in galactose and treated with Antimycin A
GSE3706 JM43_Galactose_N2_AntimycinA

Data table header descriptions
ID_REF
VALUE log2 Ratio

Data table
ID_REF VALUE
Q0045 -0.139412563
Q0050 0.535627361
Q0055 -0.435736994
Q0060 -0.050443666
Q0065 -0.366494199
Q0070 0.384579551
Q0075 -0.340031659
Q0080 1.677873561
Q0085 0.162590933
Q0105 0.378602279
Q0110 -0.026569245
Q0115 -0.045822975
Q0120 1.148999954
Q0130 1.01048776
Q0140 1.763048442
Q0160 0.957478309
Q0250 0.746555482
Q0255 0.668692816
Q0275 0.278286112
YAL001C 0.184828452

Total number of rows: 5617

Table truncated, full table size 111 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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