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Sample GSM338986 Query DataSets for GSM338986
Status Public on Feb 01, 2009
Title 1 week 4 degrees rep 1
Sample type RNA
 
Source name White adipose tissue from mice kept 1 week at 4 degrees C
Organism Mus musculus
Characteristics age: 6-8 weeks
gender: Male
strain: C57/BL6
Treatment protocol Mice were adapted at 18˚C for 1-3 weeks before being transferred to 4˚C for 1 or 5 weeks.
Growth protocol Male mice, 6-8-wk old, of the C57/Bl6 strain, which had been maintained at 22˚C were divided into groups.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix single round amplification protocol from 5 ug total RNA
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A
Description Gene expression data from mice exposed to cold
Data processing GCRMA
 
Submission date Nov 01, 2008
Last update date Aug 28, 2018
Contact name Ola Larsson
E-mail(s) [email protected]
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL1261
Series (1)
GSE13432 Adipose tissue exposed to cold
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA log2 expression level

Data table
ID_REF VALUE
1415670_at 10.0749605707699
1415671_at 10.3512392540356
1415672_at 10.9866626359467
1415673_at 10.234342734871
1415674_a_at 10.4226594483697
1415675_at 8.20551956405806
1415676_a_at 11.8637383290293
1415677_at 10.6126270732068
1415678_at 10.8923653057713
1415679_at 10.9089388659371
1415680_at 9.3801353360084
1415681_at 9.68373699244843
1415682_at 7.38804396474693
1415683_at 10.4927437505633
1415684_at 8.28797506097713
1415685_at 9.95946645775597
1415686_at 10.0408123542181
1415687_a_at 13.2647582414283
1415688_at 9.45360691066
1415689_s_at 6.84733342321424

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM338986.cel.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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