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Sample GSM338989 Query DataSets for GSM338989
Status Public on Feb 01, 2009
Title 5 weeks 30 degrees rep 1
Sample type RNA
 
Source name White adipose tissue from mice kept 5 weeks at room temperature
Organism Mus musculus
Characteristics age: 6-8 weeks
gender: Male
strain: C57/BL6
Treatment protocol Mice were adapted at 18˚C for 1-3 weeks before being transferred to 4˚C for 1 or 5 weeks.
Growth protocol Male mice, 6-8-wk old, of the C57/Bl6 strain, which had been maintained at 22˚C were divided into groups.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix single round amplification protocol from 5 ug total RNA
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A
Description Gene expression data from control mice
Data processing GCRMA
 
Submission date Nov 01, 2008
Last update date Aug 28, 2018
Contact name Ola Larsson
E-mail(s) [email protected]
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL1261
Series (1)
GSE13432 Adipose tissue exposed to cold
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA log2 expression level

Data table
ID_REF VALUE
1415670_at 10.0388488482007
1415671_at 10.4758995427794
1415672_at 11.18580584567
1415673_at 8.73390613729897
1415674_a_at 9.91287815192178
1415675_at 8.77205491919663
1415676_a_at 10.9700074376218
1415677_at 10.1153328579505
1415678_at 10.3144097130044
1415679_at 10.9137337275638
1415680_at 9.38839016070463
1415681_at 9.25544015624272
1415682_at 8.22681354686964
1415683_at 10.3636587672921
1415684_at 8.54476571677779
1415685_at 9.40332464496708
1415686_at 10.1341862591905
1415687_a_at 12.4667708039811
1415688_at 9.5074084088937
1415689_s_at 7.40908643905865

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM338989.cel.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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