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Sample GSM338992 Query DataSets for GSM338992
Status Public on Feb 01, 2009
Title 5 weeks 4 degrees rep 1
Sample type RNA
 
Source name White adipose tissue from mice kept 5 weeks at 4 degrees C
Organism Mus musculus
Characteristics age: 6-8 weeks
gender: Male
strain: C57/BL6
Treatment protocol Mice were adapted at 18˚C for 1-3 weeks before being transferred to 4˚C for 1 or 5 weeks.
Growth protocol Male mice, 6-8-wk old, of the C57/Bl6 strain, which had been maintained at 22˚C were divided into groups.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix single round amplification protocol from 5 ug total RNA
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A
Description Gene expression data from mice exposed to cold
Data processing GCRMA
 
Submission date Nov 01, 2008
Last update date Aug 28, 2018
Contact name Ola Larsson
E-mail(s) [email protected]
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL1261
Series (1)
GSE13432 Adipose tissue exposed to cold
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA log2 expression level

Data table
ID_REF VALUE
1415670_at 9.46639687536467
1415671_at 10.0036234765021
1415672_at 11.0356556861341
1415673_at 9.1766701756854
1415674_a_at 10.185689144931
1415675_at 8.41677608877016
1415676_a_at 11.301668964613
1415677_at 10.380925387214
1415678_at 10.9942687222021
1415679_at 10.5820860265369
1415680_at 9.26748011824657
1415681_at 9.54797763789714
1415682_at 7.8627400708973
1415683_at 10.6059050274898
1415684_at 8.08899527614425
1415685_at 10.2431242257137
1415686_at 10.2604512428924
1415687_a_at 12.1820922711658
1415688_at 9.72285042796333
1415689_s_at 7.36142462304477

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM338992.cel.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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