NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM3398831 Query DataSets for GSM3398831
Status Public on Sep 25, 2018
Title T5.sst-rma-gene-full-Signal(normalized)
Sample type RNA
 
Source name T5.sst-rma-gene-full-Signal(raw)
Organism Homo sapiens
Characteristics tissues: ESCC tumor tissue
gender: male
age: 56y
Treatment protocol After the specimens were removed, the ESCC tumor tissues and their adjacent normal tissues with a diameter of about 3.0 mm were harvested. Specimens were frozen in liquid nitrogen and then stored at -80 ℃ refrigerator.
Extracted molecule total RNA
Extraction protocol RNA was extracted by mirVanaTM RNA Isolation Kit (AM1561) following the manufacturer's instructions
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description lncRNA and mRNA expression of ESCC tumor tissue
Data processing RMA
 
Submission date Sep 24, 2018
Last update date Sep 25, 2018
Contact name Junliang ma
E-mail(s) [email protected]
Phone 18774563093
Organization name Hunan Cancer Hospital
Department The 2nd Department of Thoracic Surgery
Street address No. 582 Xianjiahu Road, Yuelu District
City Changsha
State/province Hunan
ZIP/Postal code 410013
Country China
 
Platform ID GPL23178
Series (1)
GSE120356 Genome-wide analyses of long non-coding RNA expression profiles and functional network analysis in esophageal squamous cell carcinoma

Data table header descriptions
ID_REF
VALUE RMA

Data table
ID_REF VALUE
AFFX-BkGr-GC03_st 5.33213
AFFX-BkGr-GC04_st 5.2102437
AFFX-BkGr-GC05_st 4.8945003
AFFX-BkGr-GC06_st 4.6615715
AFFX-BkGr-GC07_st 4.228545
AFFX-BkGr-GC08_st 4.0552697
AFFX-BkGr-GC09_st 3.786514
AFFX-BkGr-GC10_st 3.571917
AFFX-BkGr-GC11_st 3.276875
AFFX-BkGr-GC12_st 3.0081766
AFFX-BkGr-GC13_st 2.7717977
AFFX-BkGr-GC14_st 2.6215324
AFFX-BkGr-GC15_st 2.5325136
AFFX-BkGr-GC16_st 2.640618
AFFX-BkGr-GC17_st 2.5801141
AFFX-BkGr-GC18_st 2.7055426
AFFX-BkGr-GC19_st 2.9109952
AFFX-BkGr-GC20_st 3.0581257
AFFX-BkGr-GC21_st 3.1043801
AFFX-BkGr-GC22_st 3.8790169

Total number of rows: 95722

Table truncated, full table size 2556 Kbytes.




Supplementary file Size Download File type/resource
GSM3398831_T5.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap