|
| Status |
Public on Jul 07, 2010 |
| Title |
FL478 Root Salt, biological rep 2 |
| Sample type |
RNA |
| |
|
| Source name |
FL478 Root Salt 2
|
| Organism |
Oryza sativa |
| Characteristics |
genotype: FL478
stress: salt
tissue: root tip
|
| Treatment protocol |
salt root
|
| Growth protocol |
hydroponics
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
|
| |
|
| Hybridization protocol |
GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
|
| Scan protocol |
GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
|
| Description |
Gene expression data from rice root
|
| Data processing |
The data were analyzed with GCOS using Affymetrix default analysis settings and global scaling as normalization method.
|
| |
|
| Submission date |
Nov 25, 2008 |
| Last update date |
Jul 07, 2010 |
| Contact name |
Harkamal Walia |
| Organization name |
University of Nebraska
|
| Street address |
Agronomy and Horticulture
|
| City |
Lincoln |
| State/province |
NE |
| ZIP/Postal code |
68583 |
| Country |
USA |
| |
|
| Platform ID |
GPL2025 |
| Series (1) |
| GSE13735 |
Expression data from rice genotypes FL478 and IR29 |
|
