|
| Status |
Public on Dec 30, 2008 |
| Title |
SL2 expression sample 1 |
| Sample type |
RNA |
| |
|
| Source name |
wild-type Scheider cells SL2
|
| Organism |
Drosophila melanogaster |
| Characteristics |
Cell culture
|
| Treatment protocol |
No treatment
|
| Growth protocol |
Exponentiaolly growing SL2 cells in Schneider's media supplemented with 10% FBS
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Quiagen RNAeasy kit with Qiashreder following manufacturer protocol (Qiagen)
|
| Label |
biotin
|
| Label protocol |
GeneChip® One-Cycle Target Labeling and Control Reagents (Affymetrix)
|
| |
|
| Hybridization protocol |
Recommended Affymetrix protocol
|
| Scan protocol |
Recommended Affymetrix protocol
|
| Description |
wild type SL2 expression
|
| Data processing |
Data from CEL files were imported in R, scaled and normalized using the rma from the affy package (Gautier et al., 2004, Bioinfomatics).
|
| |
|
| Submission date |
Dec 14, 2008 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Marco Blanchette |
| E-mail(s) |
[email protected]
|
| Phone |
415-272-4837
|
| Organization name |
Stowers Institute for Medical Research
|
| Lab |
Marco Blanchette
|
| Street address |
1000 E. 50th St.
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
|
| Platform ID |
GPL1322 |
| Series (2) |
| GSE13940 |
Genome-wide analysis of alternative pre-mRNA splicing of the Drosophila hnRNP A/B family members |
| GSE13942 |
SL2_expression |
|
| Relations |
| Reanalyzed by |
GSE119084 |
