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Sample GSM362904 Query DataSets for GSM362904
Status Public on Mar 30, 2009
Title Adult_female_Dp(2;2)Cam3/+_triplo_4th_biological_replicate_2
Sample type RNA
 
Source name Adult female, Dp(2;2)Cam3/+, triplo 4th, biological replicate 2
Organism Drosophila melanogaster
Characteristics Adult female, 0-24h
Treatment protocol Three replicates, each containing 10 adult female flies, were collected and frozen in -70 ̊ C prior to RNA extraction
Growth protocol Flies were cultivated and crossed in vials with potato-yeast-agar medium at 25 ̊ C.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.
Label biotin
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description Gene expression data from adult females
DpC_t4-2
Data processing Raw data was normalized using RMA (R and Bioconductor).
 
Submission date Jan 22, 2009
Last update date Aug 28, 2018
Contact name Jan Larsson
E-mail(s) [email protected]
Organization name Umea University
Department Molecular Biology
Lab Jan Larsson
Street address Umea University
City Umea
ZIP/Postal code SE-90187
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE14517 Buffering of segmental and chromosomal aneuploidies in Drosophila melanogaster
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 13.40739589
1622892_s_at 7.377729828
1622893_at 13.05584459
1622894_at 6.038115892
1622895_at 8.267826677
1622896_at 7.23145059
1622897_at 5.005898663
1622898_a_at 9.290457405
1622899_at 3.91555341
1622900_at 3.873705983
1622901_at 7.043452279
1622902_at 9.87968204
1622903_s_at 8.363760379
1622904_at 4.654482307
1622905_at 3.786696193
1622906_at 9.478750242
1622907_at 7.978803385
1622908_a_at 8.658547617
1622909_at 8.792706521
1622910_at 3.787559433

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM362904.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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