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Sample GSM362916 Query DataSets for GSM362916
Status Public on Mar 30, 2009
Title Adult_female_Df(2L)J-H/+_haplo_4th_biological_replicate_2
Sample type RNA
 
Source name Adult female, Df(2L)J-H/+, haplo 4th, biological replicate 2
Organism Drosophila melanogaster
Characteristics Adult female, 0-24h
Treatment protocol Three replicates, each containing 10 adult female flies, were collected and frozen in -70 ̊ C prior to RNA extraction
Growth protocol Flies were cultivated and crossed in vials with potato-yeast-agar medium at 25 ̊ C.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.
Label biotin
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description Gene expression data from adult females
JH_h4-2
Data processing Raw data was normalized using RMA (R and Bioconductor).
 
Submission date Jan 22, 2009
Last update date Aug 28, 2018
Contact name Jan Larsson
E-mail(s) [email protected]
Organization name Umea University
Department Molecular Biology
Lab Jan Larsson
Street address Umea University
City Umea
ZIP/Postal code SE-90187
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE14517 Buffering of segmental and chromosomal aneuploidies in Drosophila melanogaster
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 13.24759036
1622892_s_at 7.329209301
1622893_at 12.90666666
1622894_at 7.397671295
1622895_at 8.12103276
1622896_at 6.70536752
1622897_at 4.944189164
1622898_a_at 9.057743639
1622899_at 3.866841348
1622900_at 3.843162609
1622901_at 5.949917654
1622902_at 7.141888727
1622903_s_at 8.405699857
1622904_at 5.135627835
1622905_at 3.677524247
1622906_at 8.825350565
1622907_at 8.119212776
1622908_a_at 8.429182541
1622909_at 8.51102907
1622910_at 4.014606568

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM362916.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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