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GEO accession:
Sample GSM36828
Query DataSets for GSM36828
Status
Public on Feb 23, 2005
Title
Wang4835_JA_633
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Characteristics
bone relapses (1=yes, 0=no): 0
Extracted molecule
total RNA
Description
RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
Submission date
Dec 03, 2004
Last update date
May 31, 2013
Contact name
Tim Jatkoe
E-mail(s)
[email protected]
Phone
(858) 320-3315
Organization name
Veridex
Street address
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Platform ID
GPL96
Series (1)
GSE2034
Breast cancer relapse free survival
Relations
Reanalyzed by
GSE31519
Reanalyzed by
GSE47561
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1663.6
P
0.000297
AFFX-BioB-M_at
3279.7
P
0.000044
AFFX-BioB-3_at
2189.2
P
0.000044
AFFX-BioC-5_at
4334.8
P
0.000060
AFFX-BioC-3_at
3737.5
P
0.000060
AFFX-BioDn-5_at
6726.6
P
0.000044
AFFX-BioDn-3_at
23586.7
P
0.000044
AFFX-CreX-5_at
52236.0
P
0.000044
AFFX-CreX-3_at
67736.4
P
0.000044
AFFX-DapX-5_at
72.5
A
0.205732
AFFX-DapX-M_at
33.0
A
0.617401
AFFX-DapX-3_at
12.1
A
0.910522
AFFX-LysX-5_at
48.9
A
0.411380
AFFX-LysX-M_at
22.7
A
0.659339
AFFX-LysX-3_at
14.4
A
0.686277
AFFX-PheX-5_at
8.7
A
0.953518
AFFX-PheX-M_at
9.3
A
0.883887
AFFX-PheX-3_at
47.1
A
0.603080
AFFX-ThrX-5_at
15.0
A
0.737191
AFFX-ThrX-M_at
82.4
A
0.544587
Total number of rows:
22283
Table truncated, full table size
606 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM36828.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
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