GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM36902
Query DataSets for GSM36902
Status
Public on Feb 23, 2005
Title
Wang677_JA-49
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Characteristics
bone relapses (1=yes, 0=no): 0
Extracted molecule
total RNA
Description
RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
Submission date
Dec 03, 2004
Last update date
May 31, 2013
Contact name
Tim Jatkoe
E-mail(s)
[email protected]
Phone
(858) 320-3315
Organization name
Veridex
Street address
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Platform ID
GPL96
Series (1)
GSE2034
Breast cancer relapse free survival
Relations
Reanalyzed by
GSE47561
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
644.6
P
0.000754
AFFX-BioB-M_at
1590.1
P
0.000052
AFFX-BioB-3_at
933.1
P
0.000070
AFFX-BioC-5_at
2196.2
P
0.000127
AFFX-BioC-3_at
1630.7
P
0.000070
AFFX-BioDn-5_at
1956.5
P
0.000044
AFFX-BioDn-3_at
10415.0
P
0.000060
AFFX-CreX-5_at
19732.0
P
0.000044
AFFX-CreX-3_at
27641.0
P
0.000044
AFFX-DapX-5_at
4.5
A
0.514890
AFFX-DapX-M_at
50.2
A
0.559354
AFFX-DapX-3_at
8.3
A
0.617401
AFFX-LysX-5_at
3.4
A
0.760937
AFFX-LysX-M_at
13.1
A
0.672921
AFFX-LysX-3_at
4.6
A
0.783496
AFFX-PheX-5_at
3.3
A
0.932322
AFFX-PheX-M_at
11.9
A
0.699394
AFFX-PheX-3_at
20.9
A
0.712257
AFFX-ThrX-5_at
13.5
A
0.686277
AFFX-ThrX-M_at
45.1
A
0.470241
Total number of rows:
22283
Table truncated, full table size
605 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM36902.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
