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GEO accession:
Sample GSM36943
Query DataSets for GSM36943
Status
Public on Feb 23, 2005
Title
Wang689_JA-67
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Characteristics
bone relapses (1=yes, 0=no): 1
Extracted molecule
total RNA
Description
RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
Submission date
Dec 03, 2004
Last update date
Apr 02, 2012
Contact name
Tim Jatkoe
E-mail(s)
[email protected]
Phone
(858) 320-3315
Organization name
Veridex
Street address
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Platform ID
GPL96
Series (1)
GSE2034
Breast cancer relapse free survival
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
614.6
P
0.000509
AFFX-BioB-M_at
1726.8
P
0.000095
AFFX-BioB-3_at
609.2
P
0.000169
AFFX-BioC-5_at
2062.6
P
0.000095
AFFX-BioC-3_at
1372.8
P
0.000081
AFFX-BioDn-5_at
1366.7
P
0.000052
AFFX-BioDn-3_at
9215.1
P
0.000052
AFFX-CreX-5_at
12967.7
P
0.000044
AFFX-CreX-3_at
21672.4
P
0.000044
AFFX-DapX-5_at
18.1
A
0.485110
AFFX-DapX-M_at
54.8
A
0.147939
AFFX-DapX-3_at
4.2
A
0.997444
AFFX-LysX-5_at
22.6
A
0.699394
AFFX-LysX-M_at
29.0
A
0.686277
AFFX-LysX-3_at
26.9
A
0.300606
AFFX-PheX-5_at
3.0
A
0.937071
AFFX-PheX-M_at
12.1
A
0.883887
AFFX-PheX-3_at
33.6
A
0.588620
AFFX-ThrX-5_at
14.0
A
0.814869
AFFX-ThrX-M_at
12.5
A
0.749204
Total number of rows:
22283
Table truncated, full table size
604 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM36943.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
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