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GEO accession:
Sample GSM36956
Query DataSets for GSM36956
Status
Public on Feb 23, 2005
Title
Wang4039_JA-137
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Characteristics
bone relapses (1=yes, 0=no): 1
Extracted molecule
total RNA
Description
RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
Submission date
Dec 03, 2004
Last update date
Apr 02, 2012
Contact name
Tim Jatkoe
E-mail(s)
[email protected]
Phone
(858) 320-3315
Organization name
Veridex
Street address
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Platform ID
GPL96
Series (1)
GSE2034
Breast cancer relapse free survival
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1796.9
P
0.000340
AFFX-BioB-M_at
4419.4
P
0.000052
AFFX-BioB-3_at
2434.8
P
0.000044
AFFX-BioC-5_at
4565.3
P
0.000081
AFFX-BioC-3_at
3507.0
P
0.000044
AFFX-BioDn-5_at
4761.9
P
0.000044
AFFX-BioDn-3_at
21624.8
P
0.000044
AFFX-CreX-5_at
38112.0
P
0.000044
AFFX-CreX-3_at
53325.2
P
0.000044
AFFX-DapX-5_at
47.3
A
0.354453
AFFX-DapX-M_at
46.8
A
0.559354
AFFX-DapX-3_at
5.4
A
0.992380
AFFX-LysX-5_at
22.7
A
0.411380
AFFX-LysX-M_at
24.9
A
0.603080
AFFX-LysX-3_at
38.2
A
0.368438
AFFX-PheX-5_at
5.9
A
0.949771
AFFX-PheX-M_at
8.3
A
0.804734
AFFX-PheX-3_at
32.8
A
0.672921
AFFX-ThrX-5_at
92.4
A
0.455413
AFFX-ThrX-M_at
12.6
A
0.932322
Total number of rows:
22283
Table truncated, full table size
604 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM36956.CEL.gz
3.2 Mb
(ftp)
(http)
CEL
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