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GEO accession:
Sample GSM38054
Query DataSets for GSM38054
Status
Public on Jan 15, 2005
Title
Breast - 2051
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.5
Patient Age: 40-50
Gender: Female
Ethnic Background: Other
Ethnic Background: Hawaiian
Tobacco Use : No
Family History of Cancer?: No
Mammogram: Yes
Oral contraceptives?: Yes
Pathological T: 2
Pathological N: 1a
Pathological M: X
Pathological Stage: Unknown
Pathological Grade: 3
Pathological ER: Positive
Pathological PR: Negative
Pathological HER/2 Neu: Positive
Primary Site: Breast
Histology: Ductal Carcinoma
Submission date
Dec 23, 2004
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1235.4
P
0.00006
AFFX-BioB-M_at
1808.9
P
0.000044
AFFX-BioB-3_at
1095.3
P
0.000044
AFFX-BioC-5_at
3791.9
P
0.000044
AFFX-BioC-3_at
5456.9
P
0.000044
AFFX-BioDn-5_at
9580.9
P
0.000044
AFFX-BioDn-3_at
16642
P
0.000044
AFFX-CreX-5_at
35272.8
P
0.000052
AFFX-CreX-3_at
39856.2
P
0.000044
AFFX-DapX-5_at
1967.6
P
0.000044
AFFX-DapX-M_at
3645.3
P
0.000225
AFFX-DapX-3_at
4535.8
P
0.000044
AFFX-LysX-5_at
283.7
P
0.000147
AFFX-LysX-M_at
426.4
P
0.000258
AFFX-LysX-3_at
777.1
P
0.00007
AFFX-PheX-5_at
437.4
P
0.000044
AFFX-PheX-M_at
529.4
P
0.00007
AFFX-PheX-3_at
539.6
P
0.00006
AFFX-ThrX-5_at
559.7
P
0.000044
AFFX-ThrX-M_at
765.3
P
0.000052
Total number of rows:
54675
Table truncated, full table size
1446 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38054.CEL.gz
7.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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