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Sample GSM38085 Query DataSets for GSM38085
Status Public on Jan 15, 2005
Title Axillary Lymph Nodes - 8218
Sample type RNA
 
Source name Axillary Lymph Nodes
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 60-70
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Chewing Tobacco
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Prior Therapy: Surgical
Relapse Since Primary Treatment: Yes
Number of Years Until Relapse: 0-5
Retreatment T: 3b
Retreatment N: 0
Retreatment M: 1a
Retreatment Metastatic Sites: Lymph Nodes
Retreatment Stage: 4
Primary Site: Skin of Left Flank
Histology: Metastatic Malignant melanoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) [email protected]
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1159.4 P 0.000147
AFFX-BioB-M_at 1607.1 P 0.000044
AFFX-BioB-3_at 944.5 P 0.000044
AFFX-BioC-5_at 3014.4 P 0.000044
AFFX-BioC-3_at 3848.2 P 0.000052
AFFX-BioDn-5_at 7385.9 P 0.000044
AFFX-BioDn-3_at 11800.3 P 0.000044
AFFX-CreX-5_at 37947.2 P 0.000044
AFFX-CreX-3_at 42707.5 P 0.000052
AFFX-DapX-5_at 1321.2 P 0.000044
AFFX-DapX-M_at 2676.3 P 0.00034
AFFX-DapX-3_at 4606.5 P 0.000044
AFFX-LysX-5_at 235.9 P 0.000581
AFFX-LysX-M_at 350.2 P 0.000662
AFFX-LysX-3_at 666.1 P 0.000052
AFFX-PheX-5_at 340 P 0.000044
AFFX-PheX-M_at 495.1 P 0.000044
AFFX-PheX-3_at 536.5 P 0.000195
AFFX-ThrX-5_at 302.3 P 0.000195
AFFX-ThrX-M_at 591.1 P 0.000052

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM38085.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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