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GEO accession:
Sample GSM38103
Query DataSets for GSM38103
Status
Public on Jan 15, 2005
Title
Lung - 8256
Sample type
RNA
Source name
Lung
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 40-50
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Presenting Symptoms: Persistent Cough
Pathological T: 2
Pathological N: 0
Pathological M: X
Pathological Stage: Unknown
Pathological Grade: 1
Primary Site: Lung
Histology: Squamous cell carcinoma
Submission date
Dec 23, 2004
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE60486
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1877.4
P
0.000081
AFFX-BioB-M_at
2537.9
P
0.000044
AFFX-BioB-3_at
1400.2
P
0.000044
AFFX-BioC-5_at
4131.1
P
0.000044
AFFX-BioC-3_at
5159.1
P
0.000044
AFFX-BioDn-5_at
10906.4
P
0.000044
AFFX-BioDn-3_at
17675.6
P
0.000044
AFFX-CreX-5_at
53004.9
P
0.000044
AFFX-CreX-3_at
57360.6
P
0.000044
AFFX-DapX-5_at
1047.2
P
0.00006
AFFX-DapX-M_at
2204.1
P
0.000754
AFFX-DapX-3_at
3717.5
P
0.000044
AFFX-LysX-5_at
213.8
P
0.000754
AFFX-LysX-M_at
290.2
P
0.023929
AFFX-LysX-3_at
519.5
P
0.000127
AFFX-PheX-5_at
300.9
P
0.00011
AFFX-PheX-M_at
360.8
P
0.00141
AFFX-PheX-3_at
589.6
P
0.000753
AFFX-ThrX-5_at
441.6
P
0.000581
AFFX-ThrX-M_at
497.8
P
0.000147
Total number of rows:
54675
Table truncated, full table size
1450 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38103.CEL.gz
7.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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