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Sample GSM38209 Query DataSets for GSM38209
Status Public on Jan 06, 2005
Title skeletal muscle of intact mice
Sample type RNA
 
Source name skeletal muscle (gastrocnemius)
Organism Mus musculus
Extracted molecule total RNA
 
Description Gastrocnemius muscle were dissected from 10 mice and pooled together. Total RNA was isolated by Trizol.
Targets were produced using standard Affymetrix procedures. Scanned images were analyzed with the MAS 5.0 software. No replicate was made.
Keywords = mouse, skeletal muscle
 
Submission date Dec 27, 2004
Last update date May 27, 2005
Contact name Andre Boivin
E-mail(s) [email protected]
Phone (418)-654-2296-Ext-6185
Fax (418)-654-2761
Organization name Laval University Hospital Center Research Center
Department SAGE Laboratory
Lab Mol. Endocrinol. & Oncology Res. Center, Laval University
Street address 2705 Boul. Laurier
City Quebec City
State/province Quebec
ZIP/Postal code G1V 4G2
Country Canada
 
Platform ID GPL81
Series (1)
GSE2121 Skeletal muscle of adrenalectomized mice with and without a glucocorticoid injection 3 or 24 h previously (MG-U74Av2)

Data table header descriptions
ID_REF reference number of the MG-U74Av2 Affymetrix probe sets
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P) or absent (A)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
100001_at 15.9176001648549 A 0.837105418506986
100002_at 86.7343635061822 A 0.438360871617446
100003_at 21522.8684165957 P 0.000218888597287359
100004_at 193.438875502358 A 0.066864946432259
100005_at 277.502700282746 P 0.0130918240485344
100006_at 38.4237937128564 A 0.418069330870521
100007_at 875.187180837173 P 0.000388205749531911
100009_r_at 54.3512423852428 A 0.0439412747386588
100010_at 196.926201197787 P 0.0278596621763756
100011_at 206.495959689416 P 0.00418032690903536
100012_at 525.067200930162 A 0.20402210284356
100013_at 187.080896976337 A 0.18968733440444
100014_at 281.008872608895 P 0.000561689501718532
100015_at 156.559820052195 A 0.066864946432259
100016_at 95.7066639259018 P 0.0130918240485344
100017_at 678.79522178626 P 0.00222767617773589
100018_at 334.803048999909 A 0.26746260656922
100019_at 262.574322678053 A 0.302547473227006
100020_at 519.570311276621 P 0.0278596621763756
100021_at 190.613164624759 P 0.0149365720096145

Total number of rows: 12488

Table truncated, full table size 580 Kbytes.




Supplementary file Size Download File type/resource
GSM38209.CEL.gz 2.9 Mb (ftp)(http) CEL
GSM38209.EXP.gz 465 b (ftp)(http) EXP

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