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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Kidney_normal_P84_MMD_SM104 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
883056 |
| Tag Length |
10 |
| |
|
| Source name |
kidney, normal, microscope dissected, extracted short sage, 84 days post natal
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: kidney
tissue preparation: microscope dissected
age: 12 weeks
sex: unknown
|
| Biomaterial provider |
Cheryl Helgason Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1728
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
[email protected]
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
|
| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
1633 |
1849.26 |
| AAAAAAAAAC |
2 |
2.26 |
| AAAAAAAAAG |
9 |
10.19 |
| AAAAAAAAAT |
13 |
14.72 |
| AAAAAAAACA |
6 |
6.79 |
| AAAAAAAACC |
2 |
2.26 |
| AAAAAAAACT |
2 |
2.26 |
| AAAAAAAAGA |
11 |
12.46 |
| AAAAAAAAGG |
1 |
1.13 |
| AAAAAAAAGT |
5 |
5.66 |
| AAAAAAAATA |
25 |
28.31 |
| AAAAAAAATC |
2 |
2.26 |
| AAAAAAAATG |
2 |
2.26 |
| AAAAAAAATT |
8 |
9.06 |
| AAAAAAACAA |
3 |
3.40 |
| AAAAAAACAT |
5 |
5.66 |
| AAAAAAACCA |
2 |
2.26 |
| AAAAAAACCC |
1 |
1.13 |
| AAAAAAACCT |
2 |
2.26 |
| AAAAAAACTA |
11 |
12.46 |
Total number of rows: 95734
Table truncated, full table size 1702 Kbytes.
| Supplementary data files not provided |
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