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GEO accession:
Sample GSM38677
Query DataSets for GSM38677
Status
Public on Dec 20, 2005
Title
28m1
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue carrying wild-type fumarate hydratase gene.
Submission date
Jan 10, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2152
The effect of FH mutations on fibroid expression profile
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
98.1
P
0.006871
AFFX-BioB-M_at
186.7
P
0.000169
AFFX-BioB-3_at
60.7
P
0.000972
AFFX-BioC-5_at
319.3
P
0.000195
AFFX-BioC-3_at
198.2
P
0.000095
AFFX-BioDn-5_at
188.7
P
0.000052
AFFX-BioDn-3_at
1370.7
P
0.000127
AFFX-CreX-5_at
2583.8
P
0.000044
AFFX-CreX-3_at
3556.1
P
0.000044
AFFX-DapX-5_at
11.2
A
0.250796
AFFX-DapX-M_at
23.2
P
0.028457
AFFX-DapX-3_at
1.6
A
0.897835
AFFX-LysX-5_at
8.2
A
0.083592
AFFX-LysX-M_at
18.5
A
0.368438
AFFX-LysX-3_at
7.6
A
0.327079
AFFX-PheX-5_at
6.6
A
0.58862
AFFX-PheX-M_at
14
A
0.313723
AFFX-PheX-3_at
19.1
A
0.425962
AFFX-ThrX-5_at
8.9
A
0.368438
AFFX-ThrX-M_at
3.6
A
0.749204
Total number of rows:
22283
Table truncated, full table size
580 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38677.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM38677.EXP.gz
481 b
(ftp)
(http)
EXP
GSM38677.RPT.gz
946 b
(ftp)
(http)
RPT
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