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GEO accession:
Sample GSM38682
Query DataSets for GSM38682
Status
Public on Dec 20, 2005
Title
44m2
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue carrying wild-type fumarate hydratase gene.
Submission date
Jan 10, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2152
The effect of FH mutations on fibroid expression profile
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
60.1
P
0.00141
AFFX-BioB-M_at
130.5
P
0.000857
AFFX-BioB-3_at
48
P
0.000581
AFFX-BioC-5_at
182.9
P
0.000169
AFFX-BioC-3_at
172.8
P
0.000127
AFFX-BioDn-5_at
154.7
P
0.000052
AFFX-BioDn-3_at
840.1
P
0.000127
AFFX-CreX-5_at
1987.8
P
0.000044
AFFX-CreX-3_at
2658.9
P
0.000044
AFFX-DapX-5_at
6.6
A
0.108979
AFFX-DapX-M_at
12.7
A
0.078002
AFFX-DapX-3_at
0.5
A
0.883887
AFFX-LysX-5_at
0.4
A
0.883887
AFFX-LysX-M_at
8.9
A
0.39692
AFFX-LysX-3_at
4.7
A
0.165861
AFFX-PheX-5_at
4.2
A
0.440646
AFFX-PheX-M_at
8.2
A
0.300606
AFFX-PheX-3_at
7.8
A
0.287743
AFFX-ThrX-5_at
3
A
0.48511
AFFX-ThrX-M_at
1.3
A
0.783476
Total number of rows:
22283
Table truncated, full table size
579 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38682.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM38682.EXP.gz
481 b
(ftp)
(http)
EXP
GSM38682.RPT.gz
941 b
(ftp)
(http)
RPT
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