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GEO accession:
Sample GSM38686
Query DataSets for GSM38686
Status
Public on Dec 20, 2005
Title
9m1
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue carrying wild-type fumarate hydratase gene.
Submission date
Jan 10, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2152
The effect of FH mutations on fibroid expression profile
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
109.2
P
0.001796
AFFX-BioB-M_at
102.1
P
0.000081
AFFX-BioB-3_at
63.6
P
0.000127
AFFX-BioC-5_at
267.8
P
0.000127
AFFX-BioC-3_at
190.1
P
0.00006
AFFX-BioDn-5_at
212.7
P
0.00006
AFFX-BioDn-3_at
1347.7
P
0.00011
AFFX-CreX-5_at
2769.7
P
0.000044
AFFX-CreX-3_at
3858.6
P
0.000044
AFFX-DapX-5_at
4.8
A
0.156732
AFFX-DapX-M_at
11.3
A
0.205732
AFFX-DapX-3_at
1.5
A
0.824672
AFFX-LysX-5_at
0.4
A
0.971543
AFFX-LysX-M_at
15.1
A
0.216524
AFFX-LysX-3_at
4.5
A
0.470241
AFFX-PheX-5_at
1.9
A
0.712257
AFFX-PheX-M_at
7.9
A
0.544587
AFFX-PheX-3_at
10.2
A
0.544587
AFFX-ThrX-5_at
9.5
A
0.41138
AFFX-ThrX-M_at
1.1
A
0.794268
Total number of rows:
22283
Table truncated, full table size
579 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38686.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM38686.EXP.gz
481 b
(ftp)
(http)
EXP
GSM38686.RPT.gz
938 b
(ftp)
(http)
RPT
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