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Sample GSM387648 Query DataSets for GSM387648
Status Public on Apr 01, 2009
Title RAW_0.35mM_HOCl_#1
Sample type RNA
 
Source name RNA from RAW 264.7 Cells
Organism Mus musculus
Characteristics Array Type; Affymetrix Mouse 430_2
amount: 5ug
bioanalyzer results: Good
cell type: RAW 264.7
Biomaterial provider Courtney G. Woods, The Hamner Institutes, 6 Davis Dr, RTP, NC 27709, [email protected], 919-558-1267, 919-558-1300
Treatment protocol Treatment: 0.35 mM HOCl in mediu
Medium: see growth protocol below
Treatment Duration: 6 hrs
Cell Confluency upon Treatement: ~80-90%
Growth protocol RAW 264.7 macrophages (RAW Cells) were cultured in DMEM supplemented with 10% FBS, 10mM HEPES, 100 U penicillin/ml, and 100 ug streptomycin/ml
Extracted molecule total RNA
Extraction protocol Triazol
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description no additional information
Data processing Robust Multi-array Average
 
Submission date Mar 30, 2009
Last update date Mar 31, 2009
Contact name Courtney G Woods
E-mail(s) [email protected]
Phone 919-558-1267
Fax 919-558-1300
Organization name The Hamner Institutes
Department Computational Biology
Street address PO Box 12137, 6 Davis Drive
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1261
Series (1)
GSE15457 Gene Expression Profiling of Cellular Dose-Response to Hypochlorous Acid (HOCl)

Data table header descriptions
ID_REF Affymetrix probe name
VALUE RMA Log Transformed Expression Value

Data table
ID_REF VALUE
1434829_at 3.186863
1425868_at 0.58835125
1416312_at 6.1223555
1455167_at 1.4411025
1435536_at 1.9363871
1453399_at 2.0726852
1442254_at 1.9505491
1415711_at 3.5882177
1430357_at 0.35397816
1455543_at 1.3397036
1429433_at 4.281399
1416678_at 4.5786743
1433190_at 0.3365116
1441956_s_at 1.3198166
1439290_at -0.58032274
1427116_at 3.4429922
1425696_at 0.09868908
1415784_at 2.0799656
1444248_at -0.6090617
1427162_a_at 2.7463121

Total number of rows: 45101

Table truncated, full table size 972 Kbytes.




Supplementary file Size Download File type/resource
GSM387648.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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