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Sample GSM387679 Query DataSets for GSM387679
Status Public on Apr 01, 2009
Title RAW_0.7mM_HOCl#3
Sample type RNA
 
Source name RNA from RAW 264.7
Organism Mus musculus
Characteristics Array Type; Affymetrix Mouse 430_2
amount: 5ug
bioanalyzer results: Good
cell type: RAW 264.7
Biomaterial provider Courtney G. Woods, The Hamner Institutes, 6 Davis Dr, RTP, NC 27709, [email protected], 919-558-1267, 919-558-1300
Treatment protocol Treatment: 0.70 mM HOCl in medium
Medium: see growth protocol below
Treatment Duration: 6 hrs
Cell Confluency upon Treatement: ~80-90%
Growth protocol RAW 264.7 macrophages (RAW Cells) were cultured in DMEM supplemented with 10% FBS, 10mM HEPES, 100 U penicillin/ml, and 100 ug streptomycin/ml
Extracted molecule total RNA
Extraction protocol Triazol
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description no additional information
Data processing Robust Multi-array Average
 
Submission date Mar 30, 2009
Last update date Mar 31, 2009
Contact name Courtney G Woods
E-mail(s) [email protected]
Phone 919-558-1267
Fax 919-558-1300
Organization name The Hamner Institutes
Department Computational Biology
Street address PO Box 12137, 6 Davis Drive
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1261
Series (1)
GSE15457 Gene Expression Profiling of Cellular Dose-Response to Hypochlorous Acid (HOCl)

Data table header descriptions
ID_REF Affymetrix probe name
VALUE RMA Log Transformed Expression Value

Data table
ID_REF VALUE
1434829_at 3.350337
1425868_at 0.8660383
1416312_at 6.19958
1455167_at 1.7408085
1435536_at 2.1880493
1453399_at 2.511736
1442254_at 2.3005304
1415711_at 3.7585316
1430357_at 0.8842988
1455543_at 1.040339
1429433_at 4.9430027
1416678_at 5.048856
1433190_at 0.27871752
1441956_s_at 1.794342
1439290_at -0.21420431
1427116_at 3.2450027
1425696_at 0.34928036
1415784_at 3.3667507
1444248_at 0.28203344
1427162_a_at 3.0622416

Total number of rows: 45101

Table truncated, full table size 971 Kbytes.




Supplementary file Size Download File type/resource
GSM387679.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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