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GEO accession:
Sample GSM38783
Query DataSets for GSM38783
Status
Public on Apr 01, 2005
Title
CT01-B1
Sample type
RNA
Source name
Rhodobacter sphaeroides
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
R. sphaeroides CT01 culture grown semi-aerobically in 3%O2 + 96%N2 + 1%CO2 (dark) to 2-3X10^8 CFU/ml; CT01 contains an omega Spr/Smr insertion in RSP4157
Keywords = Rhodobacter sphaeroides
Keywords = photosynthesis
Keywords = purple bacteria
Submission date
Jan 11, 2005
Last update date
May 27, 2005
Contact name
Timothy J Donohue
E-mail(s)
[email protected]
Phone
608-265-8465
Organization name
University of Wisconsin - Madison
Department
Bacteriology
Lab
Timothy Donohue
Street address
1552 University Avenue
City
Madison
State/province
WI
ZIP/Postal code
53726
Country
USA
Platform ID
GPL162
Series (2)
GSE2146
CT01 vs wild-type at 3% O2
GSE2150
Rhodobacter sphaeroides respiration and photosynthesis
Data table header descriptions
ID_REF
VALUE
raw data from .chp file
ABS_CALL
absent/present/marginal flag
DETECTION P-VALUE
P-value for flag
Stat Pairs
# of features on array
Stat Pairs Used
# of features used
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
11.8
A
0.818657
14
14
2
151.3
A
0.165268
14
14
3
6.4
A
0.945787
20
20
4
33.5
A
0.250796
20
20
5
56.1
A
0.116113
20
20
6
17.5
A
0.672921
20
20
7
7.8
A
0.672921
20
20
8
7.6
A
0.617411
20
20
9
16.4
A
0.631562
20
20
10
25.1
A
0.39692
20
20
11
10.8
A
0.5
20
20
12
7.2
A
0.425962
20
20
13
0.9
A
0.868639
20
20
14
1.2
A
0.966323
20
20
15
1
A
0.686277
20
20
16
0.3
A
0.724854
20
20
17
7.2
A
0.327079
20
20
18
5
A
0.966323
20
20
19
2.7
A
0.239063
20
20
20
0.9
A
0.978098
20
20
Total number of rows:
5355
Table truncated, full table size
144 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38783.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
GSM38783.EXP.gz
341 b
(ftp)
(http)
EXP
GSM38783.RPT.gz
696 b
(ftp)
(http)
RPT
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