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Sample GSM394404 Query DataSets for GSM394404
Status Public on Apr 20, 2010
Title UMARY-4543-PONS-miRNA
Sample type RNA
 
Source name Human Brain Tissue: PONS
Organism Homo sapiens
Characteristics gender: male
age: 28
pmi: 13.0
tissuebank: UMARY
prep_hyb_batch: H
tissue: pons
Extracted molecule total RNA
Extraction protocol TRIZOL
Label biotin
Label protocol Illumina Human MicroRNA Expression Universal Arrays
 
Hybridization protocol Illumina Human MicroRNA Expression Universal Arrays
Scan protocol Illumina Beadstation
Description Human Brain Tissue: PONS
Data processing Beadstudio Gene Expression Module v3.2.7, quantile normalization
 
Submission date Apr 20, 2009
Last update date May 15, 2009
Contact name J Raphael Gibbs
E-mail(s) [email protected]
Organization name National Institutue on Aging, NIH
Department Computational Biology Core
Lab Laboratory of Neurogenetics
Street address 35 Convent Drive, Bldg 35/1A1015, MSC3707
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL8178
Series (1)
GSE15745 Abundant Quantitative Trait Loci for CpG Methylation and Expression Across Human Brain Tissues

Data table header descriptions
ID_REF
VALUE Signal
Detection_Pval Illumina Detection p-value

Data table
ID_REF VALUE Detection_Pval
ILMN_3167304 370.6468 0.8122244
ILMN_3168038 753.0605 0.1682478
ILMN_3167890 39538.49 3.68E-38
ILMN_3167526 360.8196 0.8247431
ILMN_3167209 377.6408 0.802987
ILMN_3167213 554.3887 0.4994272
ILMN_3167057 2447.993 2.93E-20
ILMN_3168313 368.0519 0.8155825
ILMN_3166972 396.8851 0.7761874
ILMN_3168149 1166.432 0.001548851
ILMN_3168527 404.3088 0.7653199
ILMN_3167562 402.0769 0.7686175
ILMN_3168099 3107.962 2.98E-35
ILMN_3168017 1286.033 0.000203452
ILMN_3167951 1201.063 0.000888565
ILMN_3167172 525.3199 0.5552672
ILMN_3167994 857.6729 0.07126439
ILMN_3166997 488.7667 0.6238275
ILMN_3166980 685.3366 0.2630486
ILMN_3168362 750.3968 0.1715022

Total number of rows: 735

Table truncated, full table size 22 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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