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Sample GSM394543 Query DataSets for GSM394543
Status Public on Apr 20, 2010
Title UMARY-1105-TCTX-miRNA
Sample type RNA
 
Source name Human Brain Tissue: TCTX
Organism Homo sapiens
Characteristics gender: male
age: 16
pmi: 17.0
tissuebank: UMARY
prep_hyb_batch: H
tissue: temporal cortex
Extracted molecule total RNA
Extraction protocol TRIZOL
Label biotin
Label protocol Illumina Human MicroRNA Expression Universal Arrays
 
Hybridization protocol Illumina Human MicroRNA Expression Universal Arrays
Scan protocol Illumina Beadstation
Description Human Brain Tissue: TCTX
Data processing Beadstudio Gene Expression Module v3.2.7, quantile normalization
 
Submission date Apr 20, 2009
Last update date May 15, 2009
Contact name J Raphael Gibbs
E-mail(s) [email protected]
Organization name National Institutue on Aging, NIH
Department Computational Biology Core
Lab Laboratory of Neurogenetics
Street address 35 Convent Drive, Bldg 35/1A1015, MSC3707
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL8178
Series (1)
GSE15745 Abundant Quantitative Trait Loci for CpG Methylation and Expression Across Human Brain Tissues

Data table header descriptions
ID_REF
VALUE Signal
Detection_Pval Illumina Detection p-value

Data table
ID_REF VALUE Detection_Pval
ILMN_3167304 414.537 0.759356
ILMN_3168038 798.6069 0.08217045
ILMN_3167890 34649.41 3.68E-38
ILMN_3167526 359.8158 0.8419974
ILMN_3167209 358.6182 0.8435687
ILMN_3167213 714.261 0.1760386
ILMN_3167057 878.8362 0.03375831
ILMN_3168313 424.9261 0.7413675
ILMN_3166972 476.1099 0.6437095
ILMN_3168149 984.4841 0.008098188
ILMN_3168527 367.4234 0.8317759
ILMN_3167562 374.589 0.8217679
ILMN_3168099 2442.55 1.98E-25
ILMN_3168017 1980.515 2.33E-15
ILMN_3167951 805.7679 0.07640465
ILMN_3167172 465.5231 0.6649958
ILMN_3167994 777.0912 0.1014619
ILMN_3166997 462.9918 0.6700109
ILMN_3166980 548.3965 0.4896747
ILMN_3168362 824.3843 0.06285763

Total number of rows: 735

Table truncated, full table size 22 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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