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Status
Public on Jan 27, 2006
Title
WT, PR04M004v0
Sample type
RNA
Source name
medial gastrocnemius
Organism
Mus musculus Extracted molecule
total RNA
Description
Medial gastrocnemius removed from 8-month old muscle glycogen synthase WT or overexpressing mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
[email protected] Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
800.20000
P
0.00321
AFFX-BioB-M_at
836.00000
P
0.00110
AFFX-BioB-3_at
383.90000
P
0.00762
AFFX-BioC-5_at
1655.10000
P
0.00016
AFFX-BioC-3_at
1159.80000
P
0.00012
AFFX-BioDn-5_at
1269.50000
P
0.00011
AFFX-BioDn-3_at
8548.00000
P
0.00022
AFFX-CreX-5_at
13198.80000
P
0.00004
AFFX-CreX-3_at
25012.60000
P
0.00004
AFFX-DapX-5_at
61.00000
A
0.20573
AFFX-DapX-M_at
94.80000
A
0.12357
AFFX-DapX-3_at
9.60000
A
0.96902
AFFX-LysX-5_at
7.70000
A
0.79426
AFFX-LysX-M_at
80.20000
A
0.38259
AFFX-LysX-3_at
49.40000
A
0.28774
AFFX-PheX-5_at
4.20000
A
0.98618
AFFX-PheX-M_at
10.50000
A
0.78347
AFFX-PheX-3_at
72.40000
A
0.36843
AFFX-ThrX-5_at
22.90000
A
0.89102
AFFX-ThrX-M_at
65.30000
A
0.21652
22690 702 Kbytes .Supplementary file Size Download File type/resource GSM40083.CEL.gz
3.5 Mb
(ftp) (http) CEL
