|
| Status |
Public on Apr 20, 2010 |
| Title |
MI48 control replicate 2 |
| Sample type |
RNA |
| |
|
| Source name |
salt sensitive parent in control conditions
|
| Organism |
Oryza sativa Indica Group |
| Characteristics |
age: Seedling 10 days after germination
variety: MI48
phenotype: Salt sensitive
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated by using TRIzol Reagent (Sigma) RNA samples were processed as recommended by Affymetrix (Affymetrix geneChip Expression Analysis Technical manual; Affymetrix)
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Gene expression profile of salt sensitive parent in control
|
| Data processing |
GCOS 1.2
|
| |
|
| Submission date |
May 14, 2009 |
| Last update date |
May 14, 2009 |
| Contact name |
Awadhesh Pandit |
| E-mail(s) |
[email protected]
|
| Organization name |
NRC ON PLANT BIOTECHNOLOGY
|
| Lab |
RICE GENOME LAB
|
| Street address |
LBS BUILDING
|
| City |
NEW DELHI |
| State/province |
DELHI |
| ZIP/Postal code |
110012 |
| Country |
India |
| |
|
| Platform ID |
GPL2025 |
| Series (1) |
| GSE16108 |
Transcription profiling of parental lines and bulked salt sensitive and salt tolerant RILs derived from 2 rice varieties |
|
